iDASH Privacy & Security Workshops
Biomedical Informatics & Data Science at Yale School of Medicine, Department of Biomedical Informatics at UCSD, McWilliams School of Biomedical Informatics at UTHealth, School of Informatics and Computing at Indiana University
2024 - 🥇 1st Place
- URL: https://www.humangenomeprivacy.org/2024/index.html
- Task: Homomorphic evaluation of a transformer to classify encrypted sequences of proteins.
- Team: Jean-Philippe Bossuat (Phantom Zone)
- Presentation: https://youtu.be/iJthKRyNKSc
- Code: https://github.com/phantomzone-org/idash-2024-solution
- Backend: https://github.com/Pro7ech/lattigo
2023 - 🥈 2nd Place
- URL: https://www.humangenomeprivacy.org/2023/index.html
- Task: Use homomorphic encryption to securely detect individuals in genomic databases.
- Team: Jean-Philippe Bossuat (Tune Insight), Juan Troncoso-Pastoriza (Tune Insight), Hoon Cho (Yale & Broad Institute), Ricky Magner (Broad Institute), Can Kockan (Broad Institute), David Froelicher (MIT & Broad Institute), Matthew M. Hong (MIT), Bonnie Berger (MIT), Malika Izabachène (Independant)
- Publication: https://www.biorxiv.org/content/10.1101/2024.02.16.580613v1
- Presentation: https://www.youtube.com/watch?v=2slnWlhWDgQ
- Code: https://github.com/tuneinsight-collab/iDASH2023
- Backend: https://github.com/tuneinsight/lattigo/tree/v4.1.1
2022 - 🥉 3rd Place
- URL: https://www.humangenomeprivacy.org/2022/index.html
- Task: Use homomorphic encryption to securely outsource phenotype prediction on encrypted genomes.
- Team: Jean-Philippe Bossuat (Tune Insight), Thierry Bossy (EPFL), Juan Troncoso-Pastoriza (Tune Insight)
- Presentation: https://www.youtube.com/watch?v=DgbjYfTtWiM
- Backend: https://github.com/tuneinsight/lattigo/tree/v3.0.6
2021 - 🥈 2nd Place
- URL: https://www.humangenomeprivacy.org/2021/index.html
- Task: Use homomorphic encryption to securely classify encrypted genomes of the SARS-CoV-2 among different strains.
- Team: Jean-Philippe Bossuat (EPFL), Sinem Sav (EPFL), Juan Troncoso-Pastoriza (EPFL), Jean-Pierre Hubaux (EPFL)
- Presentation: https://www.youtube.com/watch?v=2slnWlhWDgQ
- Code: https://github.com/Pro7ech/idash2021
- Backend: https://github.com/tuneinsight/lattigo/tree/v2.1.1
2021- 🥈 2nd Place
- URL: https://www.humangenomeprivacy.org/2019/index.html
- Task: Use homomorphic encryption to securely detect individuals in genomic databases.
- Team: David Froelicher (EPFL), Yiping Ma (EPFL), Jean-Philippe Bossuat (EPFL), Juan Troncoso-Pastoriza (EPFL), Jean-Pierre Hubaux (EPFL)
- Publication: Ultrafast homomorphic encryption models enable secure outsourcing of genotype imputation
- Code: https://github.com/ldsec/Lattigo_genotype_imputation
- Backend: https://github.com/tuneinsight/lattigo/tree/v2.1.1
2024 - 🥇 1st Place
- URL: https://www.humangenomeprivacy.org/2024/index.html
- Task: Homomorphic evaluation of a transformer to classify encrypted sequences of proteins.
- Team: Jean-Philippe Bossuat (Phantom Zone)
- Presentation: https://youtu.be/iJthKRyNKSc
- Code: https://github.com/phantomzone-org/idash-2024-solution
- Backend: https://github.com/Pro7ech/lattigo
2023 - 🥈 2nd Place
- URL: https://www.humangenomeprivacy.org/2023/index.html
- Task: Use homomorphic encryption to securely detect individuals in genomic databases.
- Team: Jean-Philippe Bossuat (Tune Insight), Juan Troncoso-Pastoriza (Tune Insight), Hoon Cho (Yale & Broad Institute), Ricky Magner (Broad Institute), Can Kockan (Broad Institute), David Froelicher (MIT & Broad Institute), Matthew M. Hong (MIT), Bonnie Berger (MIT), Malika Izabachène (Independant)
- Publication: https://www.biorxiv.org/content/10.1101/2024.02.16.580613v1
- Presentation: https://www.youtube.com/watch?v=2slnWlhWDgQ
- Code: https://github.com/tuneinsight-collab/iDASH2023
- Backend: https://github.com/tuneinsight/lattigo/tree/v4.1.1
2022 - 🥉 3rd Place
- URL: https://www.humangenomeprivacy.org/2022/index.html
- Task: Use homomorphic encryption to securely outsource phenotype prediction on encrypted genomes.
- Team: Jean-Philippe Bossuat (Tune Insight), Thierry Bossy (EPFL), Juan Troncoso-Pastoriza (Tune Insight)
- Presentation: https://www.youtube.com/watch?v=DgbjYfTtWiM
- Backend: https://github.com/tuneinsight/lattigo/tree/v3.0.6
2021 - 🥈 2nd Place
- URL: https://www.humangenomeprivacy.org/2021/index.html
- Task: Use homomorphic encryption to securely classify encrypted genomes of the SARS-CoV-2 among different strains.
- Team: Jean-Philippe Bossuat (EPFL), Sinem Sav (EPFL), Juan Troncoso-Pastoriza (EPFL), Jean-Pierre Hubaux (EPFL)
- Presentation: https://www.youtube.com/watch?v=2slnWlhWDgQ
- Code: https://github.com/Pro7ech/idash2021
- Backend: https://github.com/tuneinsight/lattigo/tree/v2.1.1
2021- 🥈 2nd Place
- URL: https://www.humangenomeprivacy.org/2019/index.html
- Task: Use homomorphic encryption to securely detect individuals in genomic databases.
- Team: David Froelicher (EPFL), Yiping Ma (EPFL), Jean-Philippe Bossuat (EPFL), Juan Troncoso-Pastoriza (EPFL), Jean-Pierre Hubaux (EPFL)
- Publication: Ultrafast homomorphic encryption models enable secure outsourcing of genotype imputation
- Code: https://github.com/ldsec/Lattigo_genotype_imputation
- Backend: https://github.com/tuneinsight/lattigo/tree/v2.1.1